Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs41284175 chr13:46942835 T/C 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs41284179 chr13:46952351 C/T 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs4128783 chr10:124805633 T/G 4.14E-6 284 19.63 26.4 25.58 KM Plot
KIRP rs41295811 chr10:43475699 G/T 4.61E-5 288 25.7 25.95 11.43 KM Plot
KIRP rs41295813 chr10:43475719 C/T 4.61E-5 288 25.7 25.95 11.43 KM Plot
KIRP rs41299242 chr10:75007939 T/C 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs41301641 chr10:43127326 G/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs414125 chr12:45302007 A/G 2.12E-5 289 20.5 26.83 24.55 KM Plot
KIRP rs420464 chr7:107828945 T/A 0.000195 284 12.13 25.93 25.62 KM Plot
KIRP rs4236045 chr6:27686306 C/T 1.95E-6 280 26.37 21.93 5.5 KM Plot
KIRP rs4264577 chr2:100930662 T/C 6.31E-6 280 24.5 26.2 25.63 KM Plot
KIRP rs4276164 chr3:16043137 C/T 9.13E-5 284 20.4 27.88 25.57 KM Plot
KIRP rs4285814 chr10:124806114 G/A 0.000119 287 25.57 27.37 18.33 KM Plot
KIRP rs4320278 chr5:178176006 C/T 1.34E-7 289 12 23.23 26.48 KM Plot
KIRP rs4323807 chr10:124805804 C/T 3.4E-6 286 19.63 26.4 25.62 KM Plot